figwig

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3posts · 30d
Nov 40 posts
  1. Finally, for the detail-oriented among you (👀 @nv1ctus), the figwig file format comes with a formal Kaitai Struct specification that describes what a figwig actually *is*. figwig#23

    2 likes · 81 views
  2. The week of drops continues: this time, the figwig data format for genomics! figwig generalizes bigwigs to n-dimensional arrays, so can efficiently store huge sets of tracks, single-cell experiments, fiber-seq, and even Hi-C and scHi-C experiments. jmschrei/figwig

    43 likes · 7 reposts · 1,907 views
  3. Then, we pointed it at bam2bw and the `extract_loci` step in tangermeme; basically, reading and writing bigwigs. Massive speed boosts in both. Those are now hosted as `figwig` with credit to @nezar and Jack Huey. jmschrei/figwig

    1 like · 74 views

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